Tuesday 29 August 2023

Application of Genetic, cytogenetic, and biotechnological techniques in the breeding of different field crops

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 Application of Genetic, cytogenetic, and biotechnological techniques in the breeding of different field crops

Author: Dr. Prashant (Plant Biotechnology)

            The combination of genetic, cytogenetic, and biotechnological techniques has significantly advanced the field of crop breeding, allowing scientists to develop improved cultivars with targeted traits. These techniques are applied in the plant breeding of various field crops:

 

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A.     Genetic Techniques: Genetic techniques involve studying and manipulating genes conventionally to enhance desirable traits in plants. This includes classical breeding methods such as hybridization and selection.

B.     Cytogenetic Techniques: Cytogenetic techniques focus on the chromosomal aspects of plant genetics, providing insights into chromosomal structures, ploidy levels, chromosomal aberrations, etc.

C.     Biotechnological Techniques: Biotechnological techniques involve manipulating organisms' genetic material to achieve desired traits. This includes genetic engineering, genome editing, and other new-age molecular tools including MAS, Genomics, and other omics tools.

Applications of these three main techniques in crop breeding:

            The above techniques are elaborated on one by one: (See below)

A.     Genetic techniques have revolutionized the field of plant breeding, enabling breeders to develop crops with enhanced traits and improved agricultural sustainability. Here are some applications of genetic techniques in the breeding of various field crops:

1.      Improved Yield and Quality: Genetic techniques allow breeders to select and manipulate genes associated with increased yield, disease resistance, and better nutritional content. For example, in rice and wheat, genes for high yield and nutritional value have been identified and incorporated.

2.      Disease Resistance: Genetic engineering can introduce genes from naturally resistant plants into susceptible crops to confer resistance against diseases. This has been used in crops like potatoes to provide resistance against late blight.

3.      Pest Resistance: Genetic techniques have been employed to create crops that express insecticidal proteins, reducing the need for external chemical pesticides. Breeding for transgenic Bt cotton, for instance, produces a protein toxic to certain pests.

4.      Abiotic Stress Tolerance: Crop plants can be modified to withstand environmental stresses such as drought, salinity, and extreme temperatures. Stress-tolerant varieties of maize and rice have been developed using genetic techniques.

5.      Nutritional Enhancement: Biofortification involves enhancing the nutritional content of crops. Golden rice, for example, has been engineered to produce higher levels of vitamin A to address vitamin A deficiency in regions where rice is a staple food.

6.      Delayed Ripening: Genetic modification can be used to delay the ripening of fruits to extend shelf life and reduce post-harvest losses. This has been applied in crops like tomatoes and bananas.

7.      Herbicide Tolerance: Genetic techniques have been used to create crops resistant to specific herbicides. This allows farmers to control weeds more effectively without harming the crop.

8.      Polyploidy Induction: Polyploidy, the multiplication of the entire genome, can be induced using genetic techniques. This has been employed to develop seedless varieties in crops like grapes and watermelons.

9.      Hybrid Development: Genetic techniques are used to create hybrid plants with superior traits by selectively combining genes from different parents, resulting in increased yield, vigor, and uniformity.

10.  Conservation of Genetic Diversity: Genetic techniques are used in germplasm banks to conserve diverse genetic material, ensuring a broad genetic base for future breeding efforts.

11.  Marker-Assisted Selection (MAS): Now a day’s merger of recent techniques like MAS (involves using molecular markers linked to specific traits) to select plants in early generations is used by conventional breeders. This speeds up the breeding process by allowing breeders to select desirable plants without waiting for the trait to be expressed.

B.     Cytogenetic techniques play a crucial role in plant breeding by providing insights into the chromosomal makeup, structural variations, and genetic relationships of different crops. These techniques aid breeders in developing improved cultivars with desired traits. Applications of cytogenetic techniques in the improvement of various field crops are enlisted below:

1.      Chromosome Counting and Ploidy Determination: Cytogenetic methods like karyotyping help determine the number of chromosomes in a plant species and identify different ploidy levels. This knowledge is vital for hybridization and developing polyploid crops with enhanced traits.

2.      Creation of Chromosome Maps: Cytogenetic techniques, such as fluorescence in situ hybridization (FISH), enable the construction of detailed chromosome maps. These maps aid in understanding genome organization and assist in targeted gene introgression.

3.      Introgression of Desired Traits: Cytogenetic techniques facilitate the transfer of specific chromosomal segments containing desired traits from wild relatives to cultivated crops through methods like chromosome engineering or wide hybridization.

4.      Translocation Breeding: Chromosome translocations involve exchanging genetic material between chromosomes. Cytogenetic techniques can be used to identify translocations that confer resistance to pests, diseases, or environmental stresses.

5.      Detection of Aneuploids: Cytogenetic analysis helps identify plants with aneuploid conditions (abnormal chromosome numbers) resulting from meiotic errors. Aneuploids can sometimes exhibit novel traits valuable for breeding.

6.      Mapping QTLs: Quantitative trait loci (QTLs) associated with complex traits like yield, quality, and disease resistance can be localized on chromosomes using molecular cytogenetic techniques. This aids in marker-assisted selection.

7.      Genome Comparisons and Evolutionary Studies: Comparative cytogenetics enables the study of chromosomal rearrangements, duplications, and deletions, providing insights into crop evolution and relatedness.

8.      Detection of Structural Aberrations: Cytogenetic techniques can identify structural abnormalities such as inversions, deletions, and duplications. These alterations can influence gene expression and phenotype.

9.      Assessment of Chromosomal Stability: Cytogenetic analysis helps monitor chromosomal stability during tissue culture and propagation, ensuring the production of true-to-type plants.

10.  Genetic Mapping in Linkage Studies: Cytogenetic tools contribute to genetic linkage maps, enabling the identification of genes associated with traits of interest.

11.  Hybrid Verification: Cytogenetic methods, such as genomic in situ hybridization (GISH), aid in confirming hybrid status by distinguishing between genomes of different parental species.

12.  Genetic Diversity and Conservation: Cytogenetic techniques help assess genetic diversity within and between crop species, assisting in germplasm conservation and breeding programs.

C.     Biotechnological techniques have revolutionized the field of plant breeding, enabling scientists to manipulate genetic information and develop crops with desired traits more efficiently. Applications of biotechnological techniques in the breeding of various field crops are enlisted below:

1.      Genetic Modification (GM) or Genetic Engineering (GE): Biotechnology allows the insertion of specific genes into plants to confer desired traits, such as insect resistance, disease resistance, herbicide tolerance, and improved nutritional content.

2.      Marker-Assisted Selection (MAS): MAS involves using molecular markers linked to specific traits to select plants in early generations. This speeds up the breeding process by allowing breeders to select desirable plants without waiting for the trait to be expressed.

3.      Genome Editing: Techniques like CRISPR-Cas9 enable precise modifications of specific genes, resulting in plants with targeted improvements. Genome editing has been applied to develop disease-resistant and drought-tolerant varieties.

4.      Transgenic Crops: Transgenic crops are engineered with genes from other organisms to express desired traits. For instance, Bt cotton produces a protein toxic to certain insect pests.

5.      Crop Protection: Biotechnological methods can create plants with enhanced resistance to pests and diseases through the introduction of specific genes. This reduces the need for chemical pesticides.

6.      Abiotic Stress Tolerance: Genetic modification can confer tolerance to abiotic stresses like drought, salinity, and extreme temperatures, enhancing crop resilience in challenging environments.

7.      Nutritional Enhancement: Biotechnology allows the development of crops with improved nutritional profiles, addressing nutrient deficiencies in populations that rely on certain staple foods.

8.      Virus Resistance: Transgenic crops can be engineered to express virus-derived RNA fragments that trigger RNA interference, a natural defense mechanism, providing resistance against viral infections.

9.      Reduced Environmental Impact: Biotechnological approaches can lead to reduced chemical usage (pesticides, herbicides) and promote more sustainable agricultural practices.

10.  Faster Breeding Process: Biotechnology accelerates breeding cycles by allowing breeders to introduce specific genes without the need for multiple generations of crossing.

11.  Hybrid Development: Biotechnological tools contribute to the development of hybrid plants with superior traits by selectively combining genes from different parents, resulting in increased yield, vigor, and uniformity.

12.  Germplasm Conservation: Biotechnological methods, such as cryopreservation and tissue culture, aid in conserving plant genetic resources, preventing the loss of valuable genetic diversity.

13.  Validation of Traits: Biotechnology helps confirm the presence of specific traits early in the breeding process, ensuring that the desired characteristics are present before further propagation.

These applications highlight the impact of biotechnological techniques on crop breeding, fostering the development of crops that are more resilient, nutritious, and sustainable, and contributing to global food security and agricultural advancement.

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